TPOT is built on top of several existing Python libraries, including:
Most of the necessary Python packages can be installed via the Anaconda Python distribution, which we strongly recommend that you use. We also strongly recommend that you use of Python 3 over Python 2 if you're given the choice.
NumPy, SciPy, scikit-learn, and pandas can be installed in Anaconda via the command:
conda install numpy scipy scikit-learn pandas
DEAP, update_checker, tqdm and stopit can be installed with
pip via the command:
pip install deap update_checker tqdm stopit
For the Windows users, the pywin32 module is required if Python is NOT installed via the Anaconda Python distribution and can be installed with
pip for Python verion <=3.3 or
conda (e.g. miniconda) for any Python version:
# For Python version <=3.3 pip install pywin32 # For Any python version conda install pywin32
Optionally, you can install XGBoost if you would like TPOT to use the eXtreme Gradient Boosting models. XGBoost is entirely optional, and TPOT will still function normally without XGBoost if you do not have it installed.
conda install py-xgboost
If you have issues installing XGBoost, check the XGBoost installation documentation.
pip install scikit-mdr skrebate
Finally to install TPOT itself, run the following command:
pip install tpot
Please file a new issue if you run into installation problems.